BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027E03SP1|AL428733
(861 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1290 1707 0.0
>3x_Contig1290
Length = 6501
Score = 1707 bits (861), Expect = 0.0
Identities = 861/861 (100%)
Strand = Plus / Minus
Query: 1 gtcatcatctgaccattgggaatttggtgatgtattaatagcatggagctttaaacgcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5199 gtcatcatctgaccattgggaatttggtgatgtattaatagcatggagctttaaacgcaa 5140
Query: 61 aaattcagccttgtctaagcattcgttaaagcgatctctaatccactgcaccaaaatgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5139 aaattcagccttgtctaagcattcgttaaagcgatctctaatccactgcaccaaaatgtt 5080
Query: 121 tagcttcaaagtgcagtttttactttcattttcataccaccattttgatgttaatttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5079 tagcttcaaagtgcagtttttactttcattttcataccaccattttgatgttaatttcat 5020
Query: 181 tgaagcagctaaaatagtaagagcttttagataaagaagtaaagattcggtgcacaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5019 tgaagcagctaaaatagtaagagcttttagataaagaagtaaagattcggtgcacaactt 4960
Query: 241 tttcaactcgggggccggtatttgagtgtcaacattggtggctgatgaaatctttgttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4959 tttcaactcgggggccggtatttgagtgtcaacattggtggctgatgaaatctttgttgt 4900
Query: 301 tgctgaggtcaaagtttgattagaaggtgggcggccttgatccaaatcttcttcatcctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4899 tgctgaggtcaaagtttgattagaaggtgggcggccttgatccaaatcttcttcatcctc 4840
Query: 361 tatcgcgcaacttccgttacttagacgtttatctgacagtgggtcatagtcggttgaaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4839 tatcgcgcaacttccgttacttagacgtttatctgacagtgggtcatagtcggttgaaga 4780
Query: 421 aggaggagttggaagaatttgagagaatttcatttcagcgaacgaatacatgacaaatgc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4779 aggaggagttggaagaatttgagagaatttcatttcagcgaacgaatacatgacaaatgc 4720
Query: 481 tttggccgcaagcgattccactgcaggagttatgttggaatccaacatttgttcgctgaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4719 tttggccgcaagcgattccactgcaggagttatgttggaatccaacatttgttcgctgaa 4660
Query: 541 aggatttagtttatgatcagccctcaatactgcattttccgttagctcctgaaatatctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4659 aggatttagtttatgatcagccctcaatactgcattttccgttagctcctgaaatatctg 4600
Query: 601 aggattcagtagtgtttgttgaggtggcgaagaagtagcctttgtattatgttgatatcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4599 aggattcagtagtgtttgttgaggtggcgaagaagtagcctttgtattatgttgatatcc 4540
Query: 661 gaaaagccttacagaagctaaccctagtgccttcgataacgcattcgacgggcttaatga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4539 gaaaagccttacagaagctaaccctagtgccttcgataacgcattcgacgggcttaatga 4480
Query: 721 cgatatcgaaagccttctctccactaaagaggctcttcttcctcctgatgcatcgctaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4479 cgatatcgaaagccttctctccactaaagaggctcttcttcctcctgatgcatcgctaga 4420
Query: 781 agaagacgttctgtatctcaagggttttataacttgtgccccttggttgtttgttatggg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4419 agaagacgttctgtatctcaagggttttataacttgtgccccttggttgtttgttatggg 4360
Query: 841 tccattattagcaaaatcatc 861
|||||||||||||||||||||
Sbjct: 4359 tccattattagcaaaatcatc 4339
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6960
Number of Sequences: 1807
Number of extensions: 6960
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 861
length of database: 10,358,551
effective HSP length: 16
effective length of query: 845
effective length of database: 10,329,639
effective search space: 8728544955
effective search space used: 8728544955
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)